Biomedical Engineering Department

 

Assist. Prof. Dr. ERSIN EMRE OREN

Department of Biomedical Engineering
Department of Materials Science and Nanotechnology Engineering
TOBB University of Economics and Technology
Sogutozu Cad. No: 43,
Sogutozu, Ankara, 06560 TURKEY
e-mail: eeoren@etu.edu.tr
phone: +90 (312) 292-4514 (office); +90 (312) 292-4585 (lab)
fax: +90 (312) 292-4091		 Ersin Emre Oren
TÜRKÇE
Bionanodesign Research Highlights
THE OREN GROUP
 BIONANODESIGN LABORATORY
PRINCIPLE INVESTIGATOR
Assist. Prof. Dr. Ersin Emre OREN

Assist. Prof. Dr. Ersin Emre OREN

Bionanodesign Laboratory, TOBB ETU
Department of Biomedical Enginnering, TOBB ETU
Department of Materials Science and Nanotechnology Engineering, TOBB ETU
- Organic/inorganic interfaces
- Molecular electronics
- Protein/peptide design
- DNA/RNA/PNA design
- Surface/interface instabilities
- Thin film growth
- Quantum dot / CNT systems

GRADUATE STUDENTS
Ms. Caglanaz AKIN

Ms. Caglanaz AKIN GULTAKTI

Ph.D. @ Bionanodesign Laboratory, TOBB ETU Technology Center
Department of Materials Science and Nanotechnology Engineering, TOBB ETU

Advisor: Assist. Prof. Dr. Ersin Emre Oren
- Molecular dynamics / DFT
- Charge transport in DNA/RNA
- DNA/RNA/DNA Origami
- Free energy calculations
- Docking
Ms. Rabia KASIKCI

Ms. Rabia KASIKCI

M.Sc. @ Bionanodesign Laboratory, TOBB ETU Technology Center
Department of Biomedical Engineering, TOBB ETU

Advisor: Assist. Prof. Dr. Ersin Emre Oren
- Bioinformatics
- Molecular dynamics
Ms. Zeynep KÖKER

Ms. Zeynep KOKER

M.Sc. @ Bionanodesign Laboratory, TOBB ETU Technology Center
Department of Biomedical Engineering, TOBB ETU

Advisor: Assist. Prof. Dr. Ersin Emre Oren

- Charge transport in DNA/RNA
- Molecular dynamics
- Protein/peptide design
Ms. Seniz YARAR

Ms. Seniz YARAR

M.Sc. @ Bionanodesign Laboratory, TOBB ETU Technology Center
Department of Biomedical Engineering, TOBB ETU

Advisor: Assist. Prof. Dr. Ersin Emre Oren
- Molecular dynamics
- Bioinformatics

UNDERGRADUATE STUDENTS

 

ALUMNI
Ms. Nurseda AYDIN

Ms. Nur Seda AYDIN

[01/2015-12/2017] Graduate Student (Master of Science)

Now: Sales Marketing MAnager at Aasted, Ankara, Turkey

- Surface/interface instabilities
- Thin film growth
Ms. Elif CANDAS

Ms. Elif CANDAS

[12/2014-08/2019] Graduate Student (Master of Science)

Now: Graduate Student (Ph. D.) at Hacettepe University, Ankara, Türkiye.
- Modeling
- Molecular dynamics
- Bioinformatics
- Drug design
Dr. Aytac CELIK

Dr. Aytac CELIK

[02/2012-08/2013] Research Associate

Now: Faculty at the Department of Metallurgical and Materials Engineering of Sinop University
- Quantum dot systems
- Charge transfer in nanosystems
Ms. Busra DEMIR

Dr. Busra DEMIR

[03/2015-08/2023] Undergraduate Student, Graduate Student (Master of Science & Ph. D.)

Now: Digital Materials Scientist, Unilever, Port Sunlight, UK.

- DNA/RNA/PNA/DNA Origami
- Charge transport in DNA/RNA
- Organic/inorganic interfaces
- Protein/Peptide interactions
- Molecular Dynamics / DFT
- Homology Modelling / Docking
Ms. Sümeyye GOKCE

Ms. Sumeyye GOKCE

[09/2016-06/2019] Graduate Student (Master of Science)

Now: Graduate Student (Ph. D.) at King's College London, UK
- Modeling
- Molecular dynamics
- Charge transport in DNA/RNA
Ms. Gizem GOKCE

Ms. Gizem GOKCE

[10/2015-06/2019] Undergraduate Student (Bachelor of Science)/Graduate Student (Master of Science)

Now: Graduate Student (Ph. D.) at University of Washington, Seattle, WA, USA.
- Modeling
- Molecular dynamics
- Bioinformatics
- Drug design
Ms. Defne GORGUN

Dr. Defne GORGUN

[09/2016-08/2018] Undergraduate Student (Bachelor of Science)

Now: Software Engineer, BIOVIA R&D, IL, USA.

- Molecular dynamics
- Angiogenesis
- Tumor growth
Ms. Zeynep KÖKER

Ms. Zeynep KOKER

[09/2016-08/2018] Undergraduate Student, Graduate Student (Master of Science)

Now: Data Scientist, GÜRİŞ Teknoloji A.Ş., Ankara, Türkiye.

- Charge transport in DNA/RNA
- Molecular dynamics
- Protein/peptide design
Ms. Didem Ozkaya DEMIR

Ms. Didem OZKAYA

[08/2019-08/2022] Graduate Student (Master of Science)

Now: R&D Engineer, Akcoat, Sakarya, Türkiye
- Organic/inorganic interfaces
- Molecular dynamics
Ms. Mervenaz SAHIN

Ms. Mervenaz SAHIN

[10/2014-08/2018] Undergraduate Student (Bachelor of Science)/Graduate Student (Master of Science)

Now: Graduate Student (Ph. D.) at Sabancı University, İstanbul, Türkiye.
- Modeling
- Surface diffusion
- Drug release systems
Mr. Mert Yigit SENGUL

Mr. Mert Yigit SENGUL

[11/2011-08/2014] Graduate Student (Master of Science)

Now: AI (MAchine Learning) Scientist at Flagship Pioneering, Washington DC, USA.
- Quantum dots
- Molecular dynamics
Mr. Hamdi Tuna YENER

Mr. Hamdi Tuna YENER

[11/2014-09/2016] Undergraduate Student (Bachelor of Science)

Now: Engineer at İleti Yönetim Sistemi, İstanbul, Türkiye.
- Modeling
- Surface diffusion
- Drug release systems
www TOBB ETÜ
Address: Sogutozu Cad. No: 43, Sogutozu, Ankara, 06560 TURKEY /// Phone: +90 (312) 292-4514 Fax: +90 (312) 292-4091 eeoren@etu.edu.tr