Biomedical Engineering Department

 

Assist. Prof. Dr. ERSIN EMRE OREN

Department of Biomedical Engineering
Department of Materials Science and Nanotechnology Engineering
TOBB University of Economics and Technology

Sogutozu Cad. No: 43,
Sogutozu, Ankara, 06560 TURKEY
e-mail: eeoren@etu.edu.tr
phone: +90 (312) 292-4514 (office); +90 (312) 292-4585 (lab)
fax: +90 (312) 292-4091
Ersin Emre Oren
TÜRKÇE
Bionanodesign Research Highlights
THE OREN GROUP
BIONANODESIGN LABORATORY
PRINCIPLE INVESTIGATOR
Assist. Prof. Dr. Ersin Emre OREN

Assist. Prof. Dr. Ersin Emre OREN

Bionanodesign Laboratory, TOBB ETU
Department of Biomedical Enginnering, TOBB ETU
Department of Materials Science and Nanotechnology Engineering, TOBB ETU

- Organic/inorganic interfaces
- Molecular electronics
- Protein/peptide design
- DNA/RNA/PNA design
- Surface/interface instabilities
- Thin film growth
- Quantum dot / CNT systems

GRADUATE STUDENTS
Ms. Caglanaz AKIN

Ms. Caglanaz AKIN GULTAKTI

Ph.D. @ Bionanodesign Laboratory, TOBB ETU Technology Center
Department of Materials Science and Nanotechnology Engineering, TOBB ETU

Advisor: Assist. Prof. Dr. Ersin Emre Oren

- Molecular dynamics / DFT
- Charge transport in DNA/RNA
- DNA/RNA/DNA Origami
- Free energy calculations
- Docking
Ms. Busra DEMIR

Ms. Busra DEMIR

Ph.D. @ Bionanodesign Laboratory, TOBB ETU Technology Center
Department of Materials Science and Nanotechnology Engineering, TOBB ETU

Advisor: Assist. Prof. Dr. Ersin Emre Oren

- DNA/RNA/PNA/DNA Origami
- Charge transport in DNA/RNA
- Organic/inorganic interfaces
- Protein/Peptide interactions
- Molecular Dynamics / DFT
- Homology Modelling / Docking
Ms. Rabia KASIKCI

Ms. Rabia KASIKCI

M.Sc. @ Bionanodesign Laboratory, TOBB ETU Technology Center
Department of Biomedical Engineering, TOBB ETU

Advisor: Assist. Prof. Dr. Ersin Emre Oren

- Bioinformatics
- Molecular dynamics
Ms. Zeynep KÖKER

Ms. Zeynep KOKER

M.Sc. @ Bionanodesign Laboratory, TOBB ETU Technology Center
Department of Biomedical Engineering, TOBB ETU

Advisor: Assist. Prof. Dr. Ersin Emre Oren

- Charge transport in DNA/RNA
- Molecular dynamics
- Protein/peptide design

Ms. Seniz YARAR

Ms. Seniz YARAR

M.Sc. @ Bionanodesign Laboratory, TOBB ETU Technology Center
Department of Biomedical Engineering, TOBB ETU

Advisor: Assist. Prof. Dr. Ersin Emre Oren

- Molecular dynamics
- Bioinformatics

UNDERGRADUATE STUDENTS

 


ALUMNI
Ms. Nurseda AYDIN

Ms. Nur Seda AYDIN

[01/2015-12/2017] Graduate Student (Master of Science)

Now: Sales Marketing Engineer at Embryomed, Ankara, Turkey

- Surface/interface instabilities
- Thin film growth
Ms. Elif CANDAS

Ms. Elif CANDAS

[12/2014-08/2019] Graduate Student (Master of Science)

- Modeling
- Molecular dynamics
- Bioinformatics
- Drug design
Dr. Aytac CELIK

Dr. Aytac CELIK

[02/2012-08/2013] Research Associate

Now: Faculty at the Department of Metallurgical and Materials Engineering of Sinop University

- Quantum dot systems
- Charge transfer in nanosystems
Ms. Sümeyye GOKCE

Ms. Sumeyye GOKCE

[09/2016-06/2019] Graduate Student (Master of Science)

Now: Graduate Student (Ph. D.) at King's College London, UK

- Modeling
- Molecular dynamics
- Charge transport in DNA/RNA
Ms. Gizem GOKCE

Ms. Gizem GOKCE

[10/2015-06/2019] Undergraduate Student (Bachelor of Science)/Graduate Student (Master of Science)

Now: Graduate Student (Ph. D.) at University of Washington
- Modeling
- Molecular dynamics
- Bioinformatics
- Drug design
Ms. Defne GORGUN

Ms. Defne GORGUN

[09/2016-08/2018] Undergraduate Student (Bachelor of Science)

Now: Graduate Student (Ph. D.) at the Center for Biophysics and Quantitative Biology of University of Illinois at Urbana-Champaign

- Molecular dynamics
- Angiogenesis
- Tumor growth
Ms. Didem Ozkaya DEMIR

Ms. Didem OZKAYA

[08/2019-08/2022] Graduate Student (Master of Science)

Now:
- Organic/inorganic interfaces
- Molecular dynamics
Ms. Mervenaz SAHIN

Ms. Mervenaz SAHIN

[10/2014-08/2018] Undergraduate Student (Bachelor of Science)/Graduate Student (Master of Science)

Now: Graduate Student (Ph. D.) at Sabancı University
- Modeling
- Surface diffusion
- Drug release systems
Mr. Mert Yigit SENGUL

Mr. Mert Yigit SENGUL

[11/2011-08/2014] Graduate Student (Master of Science)

Now: Graduate Student (Ph. D.) at the Department of Materials Science and Engineering of Penn State
- Quantum dots
- Molecular dynamics
Mr. Hamdi Tuna YENER

Mr. Hamdi Tuna YENER

[11/2014-09/2016] Undergraduate Student (Bachelor of Science)

Now: Engineer at ASELSAN, Ankara, Turkey

- Modeling
- Surface diffusion
- Drug release systems
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